View gene FOXP3 - VitiVar - Compendium of genes and variants associated with vitiligo

VitiVar - Compendium of genes and variants associated with vitiligo

forkhead box P3 (FOXP3)

LOVD v.3.0 Build 13 [ Current LOVD status ]
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Curator: IGIB

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View gene FOXP3

General information
Gene symbol	FOXP3
Gene name	forkhead box P3
Chromosome	X
Chromosomal band	p11.23
Gene Alias
Imprinted	Unknown
Genomic reference	LRG_62
Transcript reference	NM_014009.3
Study Type	Both
Expression Status[Source: Literature]	Associated with NA;DOWNREGULATION in Vitiligo Birlea et al.(2010);Parveen et al.(2013);Song et al.(2013); Kidir et al.(2017)
Expression Summary[Source: Literature]	Sample : Skin \|\| Population : EUROPEAN;INDIAN;HAN CHINESE;TURKEY \|\| Gene name used in study : FOXP3
Total number of public variants reported	3
Unique public DNA variants reported	3
Individuals with public variants	0
Hidden variants	0
Curators (1)	IGIB
Date created	September 03, 2015
Date last updated	September 03, 2015
Version	FOXP3:150903

Graphical displays and utilities
Graphs	Graphs displaying summary information of all variants in the database »
UCSC Genome Browser	Show variants in the UCSC Genome Browser (full view, compact view)
Ensembl Genome Browser	Show variants in the Ensembl Genome Browser (full view, compact view)
NCBI Sequence Viewer	Show distribution histogram of variants in the NCBI Sequence Viewer

Links to other resources
Gene Expression Meta-Analysis	http://vitivar.igib.res.in/gestatus.php?id=FOXP3
HGNC	6106
Entrez Gene	50943
PubMed articles	FOXP3
OMIM - Gene	300292
HGMD	FOXP3
GeneCards	FOXP3
GeneTests	FOXP3

Active transcripts

Legend

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ID	Chr	Name	NCBI ID	NCBI Protein ID	Variants
00254	X	transcript variant 1	NM_014009.3	NP_054728.2	3

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