View transcript variants

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AscendingGene     

Transcript     

Chr     

Allele     

DNA change     

DB-ID     

Gene     

dbSNP ID     

Risk allele     

Population     

Pubmed Reference     

IGV     

1000G     

gnomAD     

ExAC     

GTEx     

Variant remarks     

Owner     

Effect     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
ACTA2 NM_001141945.1 10 Unknown g.90749256G>A ACTA2_000001 FAS rs2234767 A KOREAN Jeong et al.(2010) NA 0.184105 0.1142 0.1475 View in GTEx CANDIDATE IGIB ./. - c.-24+1440C>T r.(=) p.(=)
AHR NM_001621.4 7 Unknown g.17379110G>A AHR_000001 AHR rs2066853 A HAN CHINESE Wang et al.(2012) 0.1563 0.270767 0.2169 0.1565 View in GTEx CANDIDATE IGIB ./. - c.1661G>A - -
APEX1 NM_001641.3 14 Unknown g.20925154T>G APEX1_000001 APEX1 rs3136820 - CHINESE Wei et al.(2013) NA {1000G:rs3136820} - - View in GTEx CANDIDATE IGIB ./. - c.444T>G r.(?) p.(Asp148Glu)
ARID5B NM_032199.2 10 Unknown g.63779871C>T ARID5B_000001 ARID5B rs71508903 T EUROPEAN Jin et al.(2016) NA 0.148562 0.143 . View in GTEx GWAS IGIB ./. - c.733+19791C>T r.(=) p.(=)
ATXN2 NM_002973.3 12 Unknown g.111904371T>A ATXN2_000001 SH2B3 rs4766578 - EUROPEAN Jin et al.(2011) NA 0.848842 0.6668 . View in GTEx GWAS IGIB ./. - c.3317-1852A>T r.(=) p.(=)
AUTS2 NM_015570.2 7 Unknown g.70020160T>C AUTS2_000001 7q11 rs734930 G;- CAUCASIAN/EUROPEAN; MULTIPLE POPULATIONS(META-ANALYSIS) Jin et al.(2009);Smith et al.(2010) 0.4143 0.44349 0.5386 . View in GTEx CANDIDATE IGIB ./. - c.690+119393T>C r.(=) p.(=)
BACH2 NM_021813.2 6 Unknown g.90957463C>T BACH2_000001 BACH2 rs3757247 - EUROPEAN Jin et al.(2011) 0.472 0.395767 0.3709 . View in GTEx GWAS IGIB ./. - c.-275+4769G>A r.(=) p.(=)
BACH2 NM_021813.2 6 Unknown g.90976768G>A BACH2_000002 BACH2 rs72928038 A European Jin et al.(2016) NA 0.0714856 0.1002 . View in GTEx GWAS IGIB ./. - c.-353+4800C>T - -
BCHE NM_000055.2 3 Unknown g.165491280C>T BCHE_000001 BCHE rs1803274 NA BRAZIL Machado et al.(2015) NA 0.158546 0.1769 0.1891 View in GTEx Candidate IGIB ./. - - - -
BCHE NM_000055.2 3 Unknown g.165505177A>G BCHE_000002 BCHE rs1355538 NA BRAZIL Machado et al.(2015) 0.5418 0.439896 0.4561 . View in GTEx Candidate IGIB ./. - - - -
BCL2L12 NM_001040668.1 19 Unknown g.50168871G>A IRF3_000001 IRF3 rs2304206 A EUROPEAN Jin et al.(2016) 0.3461 0.373003 0.3564 . View in GTEx GWAS IGIB ./. - c.-210G>A r.(=) p.(=)
BLOC1S5-TXNDC5 NR_037616.1 6 Unknown g.7881931T>C TXNDC5_000003 TXNDC5 rs1043784 - KOREAN Jeong et al.(2009) 0.1353 0.223243 0.2167 . View in GTEx CANDIDATE IGIB ./. - n.2904A>G - -
BLOC1S5-TXNDC5 NR_037616.1 6 Unknown g.7882205G>A TXNDC5_000002 TXNDC5 rs7764128 - KOREAN Jeong et al.(2009) NA 0.222444 0.2157 . View in GTEx CANDIDATE IGIB ./. - n.2630C>T - -
BLOC1S5-TXNDC5 NR_037616.1 6 Unknown g.7883073C>T TXNDC5_000001 TXNDC5 rs8643 - KOREAN Jeong et al.(2009) NA 0.0972444 0.1028 . View in GTEx CANDIDATE IGIB ./. - n.1762G>A - -
BMP6 NM_001718.4 6 Unknown g.7881931T>C TXNDC5_000003 TXNDC5 rs1043784 - KOREAN Jeong et al.(2009) 0.1353 0.223243 0.2167 . View in GTEx CANDIDATE IGIB ./. - c.*1355T>C r.(=) p.(=)
C12orf10 NM_021640.3 12 Unknown g.53693403C>G C12orf10_000001 MYG1 rs1465073 -;G INDIAN; CAUCASIAN/EUROPEAN Dwivedi et al.(2013);Philips et al.(2010) NA 0.422324 0.3595 . View in GTEx EXPRESSION IGIB ./. - c.-119C>G r.(=) p.(=)
C1QTNF6 NM_182486.1 22 Unknown g.37581485C>A C1QTNF6_000001 C1QTNF6 rs229527 T;A EUROPEAN; EUROPEAN Jin et al.(2010); Jin et al.(2016) 0.4576 0.45008 0.4026 0.4395 View in GTEx GWAS IGIB ./. - c.62G>T r.(?) p.(Gly21Val)
C9orf3 NM_032823.5 9 Unknown g.97689045G>A C9orf3_000001 9q22 rs4744411 A;- CAUCASIAN/EUROPEAN; NA Jin et al.(2009);Smith et al.(2010) NA 0.290935 0.351 . View in GTEx CANDIDATE IGIB ./. - c.1365-28414G>A - -
CASP7 NM_033338.5 10 Unknown g.115481018C>T CASP7_000002 CASP7 rs3814231 - EUROPEAN Jin et al.(2011) {IGV:rs3814231} 0.261182 0.2402 . View in GTEx GWAS IGIB ./. - c.346+91C>T r.(=) p.(=)
CASP7 NM_033338.5 10 Unknown g.115489589T>C CASP7_000001 CASP7 rs4353229 - EUROPEAN Jin et al.(2011) 0.2584 0.251797 0.2433 . View in GTEx GWAS IGIB ./. - c.*290T>C r.(=) p.(=)
CASP7 NM_033338.5 10 Unknown g.115488331G>A CASP7_000003 CASP7 rs12771452 A EUROPEAN Jin et al.(2016) NA 0.250799 0.2434 . View in GTEx GWAS IGIB ./. - c.782-739G>A r.(=) p.(=)
CAT NM_001752.3 11 Unknown g.34482908C>T CAT_000002 CAT rs769217 T;T;-;- MULTIPLE POPULATIONS(META-ANALYSIS); EUROPEAN; KOREAN; CAUCASIAN/EUROPEAN Lv et al.(2010);Gavalas et al.(2006);Park et al.(2006);Casp et al.(2002) 0.2204 0.26278 0.2191 0.2417 View in GTEx CANDIDATE IGIB ./. - c.1167C>T r.(=) p.(=)
CAT NM_001752.3 11 Unknown g.34460472A>T CAT_000001 CAT rs7943316 T;- CHINESE; KOREAN Liu et al.(2010);Park et al.(2006) 0.3636 0.488019 0.5639 . View in GTEx CANDIDATE IGIB ./. - c.-89A>T r.(=) p.(=)
CDH1 NM_004360.3 16 Unknown g.68839302T>C CDH1_000001 CDH1 rs10431924 - NA Tarlé et al.(2015) 0.4472 0.416534 0.4621 . View in GTEx CANDIDATE IGIB ./. - c.388-3025T>C r.(=) p.(=)
CDK5RAP1 NM_016408.3 20 Unknown g.31981849T>C CDK5RAP1_000002 CDK5RAP1 rs291700 - KOREAN Shin et al.(2012) 0.7087 0.595647 0.6219 0.6479 View in GTEx CANDIDATE IGIB ./. - c.432A>G r.(=) p.(=)
CDK5RAP1 NM_016408.3 20 Unknown g.31974395G>A CDK5RAP1_000001 CDK5RAP1 rs158676 - KOREAN Shin et al.(2012) 0.7097 0.681909 0.6675 . View in GTEx CANDIDATE IGIB ./. - c.755+734C>T r.(=) p.(=)
CLEC11A NM_002975.2 19 Unknown g.51228746C>T CLEC11A_000001 CLEC11A rs13866 T TAIWAN Lan et al.(2009) NA 0.275359 0.2301 0.3461 View in GTEx CANDIDATE IGIB ./. - c.*22C>T r.(=) p.(=)
COMT NM_000754.3 22 Unknown g.19951271G>A COMT_000001 COMT rs4680 A;- CHINESE; NA Li et al.(2009);Türsen et al.(2002) 0.4186 0.369209 0.4475 0.4727 View in GTEx CANDIDATE IGIB ./. - c.472G>A r.(?) p.(Val158Met)
CPVL NM_019029.2 7 Unknown g.29132279A>G CPVL_000001 CPVL rs117744081 G EUROPEAN Jin et al.(2016) NA 0.0101837 0.0234 0.0225 View in GTEx GWAS IGIB ./. - c.502T>C r.(?) p.(Tyr168His)
CTLA4 NM_005214.4 2 Unknown g.204732714A>G CTLA4_000001 CTLA4 rs231775 -;-;G INDIAN; EUROPEAN; ROMANIAN,CAUCASIAN Dwivedi et al.(2011);Birlea et al.(2010);Birlea et al.(2009) 0.3574 0.427316 0.425 0.4112 View in GTEx CANDIDATE IGIB ./. - c.49A>G r.(?) p.(Thr17Ala)
CYP2C9 NM_000771.3 10 Unknown g.96741053_96741054del CYP2C9_000001 CYP2C9*3 rs1057910 - SAUDI Alzolibani et al.(2014) NA 0.0485224 0.0481 0.0637 View in GTEx CANDIDATE IGIB ./. - c.1075_1076del r.(?) p.(Ile359*)
DDR1 NM_013994.2 6 Unknown g.30855251G>A DDR1_000002 DDR1 rs4618569 T BRAZILIAN Silva et al.(2010) 0.5496 0.415535 0.2552 . View in GTEx CANDIDATE IGIB ./. - c.-1256G>A r.(=) p.(=)
DDR1 NM_013994.2 6 Unknown g.30865204A>C DDR1_000001 DDR1 rs2267641 C BRAZILIAN Silva et al.(2010) NA 0.282348 0.1777 0.23 View in GTEx CANDIDATE IGIB ./. - c.2064A>C r.(=) p.(=)
DEF8 NM_207514.2 16 Unknown g.90026512T>C DEF8_000001 DEF8 rs4268748 C EUROPEAN Jin et al.(2016) NA 0.278554 0.3038 . View in GTEx GWAS IGIB ./. - c.698-827T>C - -
DNAH5 NM_001369.2 5 Unknown g.13717471T>C DNAH5_000001 DNAH5 rs2277046 - KOREAN Cheong et al.(2013) NA 0.158946 0.0996 0.1406 View in GTEx GWAS IGIB ./. - c.12658A>G r.(?) p.(Thr4220Ala)
ESR1 NM_000125.3 6 Unknown g.152163335T>C ESR1_000001 ESR1 rs2234693 - KOREAN Jin et al.(2004) NA 0.446286 0.4734 . View in GTEx CANDIDATE IGIB ./. - c.453-397T>C r.(=) p.(=)
FANCA NM_000135.2 16 Unknown g.89818089A>G FANCA_000001 MC1R rs9926296 - EUROPEAN Jin et al.(2011) NA 0.666134 0.5483 . View in GTEx GWAS IGIB ./. - c.3066+457T>C r.(=) p.(=)
FARP2 NM_014808.2 2 Unknown g.242407588G>A FARP2_000001 FARP2 rs41342147 A EUROPEAN Jin et al.(2016) NA 0.0842652 0.1023 0.1034 View in GTEx GWAS IGIB ./. - c.1927G>A r.(?) p.(Val643Ile)
FOXO3 NM_001455.3 6 Unknown g.109003321T>C FOXO3_000002 FOXO3A rs4946936 - NA Ozel et al.(2013) NA 0.482628 0.5314 . View in GTEx EXPRESSION IGIB ./. - c.*2326T>C r.(=) p.(=)
FOXO3 NM_001455.3 6 Unknown g.108888593C>G FOXO3_000001 FOXO3A rs2253310 - NA Ozel et al.(2013) NA 0.470248 0.4968 . View in GTEx EXPRESSION IGIB ./. - c.621+5561C>G r.(=) p.(=)
FOXP1 NM_032682.5 3 Unknown g.71573135T>G FOXP1_000001 FOXP1 rs17008723 G EUROPEAN Jin et al.(2010) 0.1271 0.11222 0.1505 . View in GTEx CANDIDATE IGIB ./. - c.-297-30429A>C r.(=) p.(=)
FOXP1 NM_032682.5 3 Unknown g.71557945C>A FOXP1_000002 FOXP1 rs34346645 A EUROPEAN Jin et al.(2016) NA 0.197484 0.3149 . View in GTEx GWAS IGIB ./. - c.-297-15239G>T r.(=) p.(=)
FOXP3 NM_014009.3 X Unknown g.49118461T>C FOXP3_000002 FOXP3 rs3761547 - EUROPEAN Birlea et al.(2010) 0.2438 0.144371 0.0954 . View in GTEx CANDIDATE IGIB ./. - c.-23+2662A>G - -
FOXP3 NM_014009.3 X Unknown g.49118241T>G FOXP3_000001 FOXP3 rs3761548 A;A INDIAN; HAN CHINESE Parveen et al.(2013);Song et al.(2013) {IGV:rs3761548} {1000G:rs3761548} - - View in GTEx CANDIDATE IGIB ./. - c.-23+2882A>C - -
FOXP3 NM_014009.3 X Unknown g.49115886T>C FOXP3_000003 FOXP3 rs2232365 G HAN CHINESE Song et al.(2013) NA 0.590464 0.6077 . View in GTEx CANDIDATE IGIB ./. - c.-22-902A>G r.(=) p.(=)
GAGE1 NM_001040663.2 X Unknown g.49370778C>A GAGE1_000001 FOXP3 rs5906843 - EUROPEAN Birlea et al.(2010) NA . . . View in GTEx CANDIDATE IGIB ./. - c.*160C>A r.(=) p.(=)
GAGE10 NM_001098413.2 X Unknown g.49168260A>T GAGE10_000002 FOXP3 rs11798415 - EUROPEAN Birlea et al.(2010) NA 0.397881 0.4382 . View in GTEx CANDIDATE IGIB ./. - c.203-5382A>T r.(=) p.(=)
GAGE10 NM_001098413.2 X Unknown g.49167548A>G GAGE10_000001 FOXP3 rs5906777 - EUROPEAN Birlea et al.(2010) NA 0.397616 0.4366 . View in GTEx CANDIDATE IGIB ./. - c.202+5545A>G r.(=) p.(=)
GAGE10 NM_001098413.2 X Unknown g.49164880T>C GAGE10_000003 FOXP3 rs4824755 - EUROPEAN Birlea et al.(2010) NA 0.395762 0.4359 . View in GTEx CANDIDATE IGIB ./. - c.202+2877T>C r.(=) p.(=)
GPX1 NM_000581.2 3 Unknown g.49395695A>G GPX1_000001 NA rs4991448 C INDIAN Mansuri et al.(2016) NA {1000G:rs4991448} - - View in GTEx Candidate IGIB ./. - - - -
GPX1 NM_000581.2 3 Unknown g.49395698C>G GPX1_000002 GPX1 rs8179169 C INDIAN Mansuri et al.(2016) NA 0.0125799 0.009 0.0059 View in GTEx Candidate IGIB ./. - - - -
GSTP1 NM_000852.3 11 Unknown g.67353579C>T GSTP1_000001 GSTP1 rs1138272 T RUSSIAN Minashkin et al.(2012) NA 0.0335463 0.0605 0.0615 View in GTEx CANDIDATE IGIB ./. - c.341C>T r.(?) p.(Ala114Val)
GZMB NM_004131.4 14 Unknown g.25102160C>T GZMB_000002 GZMB rs8192917 G;C;C EUROPEAN; EUROPEAN; EUROPEAN Jin et al.(2010);Ferrara et al.(2013); Jin et al.(2016) 0.3247 0.319289 0.273 0.2524 View in GTEx GWAS,CANDIDATE IGIB ./. - c.164G>A r.(?) p.(Arg55Gln)
GZMB NM_004131.4 14 Unknown g.25103414G>A GZMB_000001 GZMB rs2273844 A EUROPEAN Jin et al.(2010) 0.3192 0.295927 0.2529 0.3106 View in GTEx GWAS IGIB ./. - c.-48C>T r.(=) p.(=)
GZMB NM_004131.4 14 Unknown g.25101629T>C GZMB_000004 GZMB rs10909625 C EUROPEAN Ferrara et al.(2013) NA 0.302516 0.2572 0.2371 View in GTEx CANDIDATE IGIB ./. - c.240A>G r.(=) p.(=)
GZMB NM_004131.4 14 Unknown g.25100348T>A GZMB_000003 GZMB rs185979723 - EUROPEAN Ferrara et al.(2013) NA 0.000599042 3.23E-05 0.0001 View in GTEx CANDIDATE IGIB ./. - c.673A>T r.(?) p.(Met225Leu)
HCG9 NR_028032.1 6 Unknown g.29943067G>A HCG9_000001 HCG9 rs6904029 A EUROPEAN Jin et al.(2010) 0.1667 0.25599 0.2774 0.3413 View in GTEx GWAS IGIB ./. - n.176G>A - -
HCG9 NR_028032.1 6 Unknown g.29944158T>C HCG9_000002 HCG9 rs3823375 C;C JAPANESE; EUROPEAN Jin et al.(2015);Jin et al.(2010) 0.1837 0.299321 0.3182 . View in GTEx CANDIDATE, GWAS IGIB ./. - n.403+864T>C - -
HERC2 NM_004667.5 15 Unknown g.28356859C>T HERC2_000002 OCA2-HERC2 rs1129038 - EUROPEAN Jin et al.(2011) 0.06198 0.176917 0.5552 0.5073 View in GTEx GWAS IGIB ./. - c.*50G>A r.(=) p.(=)
HERC2 NM_004667.5 15 Unknown g.28365618A>G HERC2_000001 OCA2-HERC2 rs12913832 - EUROPEAN Jin et al.(2011) 0.06315 0.177316 0.5581 . View in GTEx GWAS IGIB ./. - c.13272+874T>C r.(=) p.(=)
HERC2 NM_004667.5 15 Unknown g.28535266A>C HERC2_000003 HERC2 rs1635168 A EUROPEAN Jin et al.(2016) 0.4101 0.371006 0.2124 . View in GTEx GWAS IGIB ./. - c.322+2768T>G r.(=) p.(=)
ICA1 NM_004968.3 7 Unknown g.8176301G>A ICA1_000001 ICA1 rs2192346 - EUROPEAN Jin et al.(2010) NA 0.791534 0.7498 . View in GTEx CANDIDATE IGIB ./. - c.1060+2169C>T r.(=) p.(=)
IFIH1 NM_022168.3 2 Unknown g.163124051C>T IFIH1_000001 IFIH1 rs1990760 -;G EUROPEAN; EUROPEAN Jin et al.(2011); Jin et al.(2016) 0.5155 0.643371 0.5411 0.4953 View in GTEx GWAS IGIB ./. - c.2836G>A r.(?) p.(Ala946Thr)
IFIH1 NM_022168.3 2 Unknown g.163124637T>C IFIH1_000002 IFIH1 rs35667974 G EUROPEAN Jin et al.(2016) NA 0.00239617 0.0126 0.0116 View in GTEx Candidate IGIB ./. - c.2767A>G r.(?) p.(Ile923Val)
IFIH1 NM_022168.3 2 Unknown g.163128824T>C IFIH1_000003 IFIH1 rs3747517 A EUROPEAN Jin et al.(2016) 0.4363 0.410144 0.335 0.3238 View in GTEx Candidate IGIB ./. - c.2528A>G r.(?) p.(His843Arg)
IFNE NM_176891.4 9 Unknown g.21481483G>A IFNE_000001 IFNE rs2039381 T KOREAN Cho et al.(2013) 0.1436 0.0980431 0.0358 0.045 View in GTEx CANDIDATE IGIB ./. - c.211C>T - -
IFNG NM_000619.2 12 Unknown g.68552522T>A IFNG_000001 IFNG rs2430561 -;A;A NA; IRANIAN; EGYPT Dwivedi et al.(2013);Namain et al.(2008); Karam et al.(2017) NA 0.280152 0.3577 . View in GTEx EXPRESSION, CANDIDATE IGIB ./. - c.115-483A>T r.(=) p.(=)
IKZF4 NM_022465.3 12 Unknown g.56412487T>G IKZF4_000002 IKZF4 rs1701704 T;- EUROPEAN; EUROPEAN Jin et al.(2011);Jin et al.(2010) 0.7686 0.798123 0.7453 . View in GTEx GWAS, CANDIDATE IGIB ./. - c.-2791T>G r.(=) p.(=)
IKZF4 NM_022465.3 12 Unknown g.56416928A>C IKZF4_000001 IKZF4 rs2456973 - EUROPEAN Jin et al.(2011) NA - - View in GTEx GWAS IGIB ./. - c.88-527A>C r.(=) p.(=)
IL1RAPL1 NM_014271.3 X Unknown g.29737404G>T IL1RAPL1_000001 IL1RAPL1 rs73456411 T EUROPEAN Jin et al.(2016) NA 0.0715232 0.0591 . View in GTEx GWAS IGIB ./. - c.778+50783G>T r.(=) p.(=)
IL2RA NM_000417.2 10 Unknown g.6100725G>A IL2RA_000001 IL2RA rs3134883 T HAN CHINESE Tang et al.(2013) NA 0.202276 0.249 . View in GTEx GWAS IGIB ./. - c.64+3326C>T - -
IL2RA NM_000417.2 10 Unknown g.6098824T>C IL2RA_000002 IL2RA rs706779 A;C EUROPEAN; EUROPEAN Jin et al.(2010); Jin et al.(2016) NA 0.458067 0.4557 . View in GTEx GWAS IGIB ./. - c.64+5227A>G r.(=) p.(=)
IRF3 NM_001571.5 19 Unknown g.50168871G>A IRF3_000001 IRF3 rs2304206 A EUROPEAN Jin et al.(2016) 0.3461 0.373003 0.3564 . View in GTEx GWAS IGIB ./. - c.-9+17C>T r.? p.?
IRF4 NM_001195286.1 6 Unknown g.396321C>T IRF4_000001 IRF4 rs12203592 T EUROPEAN Jin et al.(2016) 0.006211 0.0367412 0.0885 . View in GTEx GWAS IGIB ./. - c.492+386C>T r.(=) p.(=)
KITLG NM_003994.5 12 Unknown g.88942980G>A KITLG_000001 KITLG rs11104947 A TAIWANIAN Lan et al.(2009) NA 0.0269569 0.0142 . View in GTEx CANDIDATE IGIB ./. - c.16-3338C>T r.(=) p.(=)
LPP NM_005578.3 3 Unknown g.188087628C>T LPP_000005 LPP rs9851967 T HAN CHINESE Tang et al.(2013) 0.2831 0.271166 0.3476 . View in GTEx GWAS IGIB ./. - c.-9-36272C>T r.(=) p.(=)
LPP NM_005578.3 3 Unknown g.188112554C>A LPP_000001 LPP rs1464510 T EUROPEAN Jin et al.(2010) 0.4369 0.442692 0.4096 . View in GTEx GWAS IGIB ./. - c.-9-11346C>A r.(=) p.(=)
LPP NM_005578.3 3 Unknown g.188089254C>T LPP_000004 LPP rs13076312 T;T EUROPEAN; EUROPEAN Quan et al.(2010); Jin et al.(2016) 0.5279 0.509585 0.4496 . View in GTEx GWAS IGIB ./. - c.-9-34646C>T r.(=) p.(=)
LPP NM_005578.3 3 Unknown g.188114589G>T LPP_000002 LPP rs13091753 T EUROPEAN Jin et al.(2010) 0.4411 0.399361 0.3829 . View in GTEx GWAS IGIB ./. - c.-9-9311G>T r.(=) p.(=)
LPP NM_005578.3 3 Unknown g.188124354C>A LPP_000003 LPP rs1559810 T EUROPEAN Jin et al.(2010) 0.4969 0.400958 0.361 . View in GTEx GWAS IGIB ./. - c.193+253C>A r.(=) p.(=)
LTA NM_001159740.2 6 Unknown g.31540071G>A LTA_000001 LTA rs1800683 - EUROPEAN Birlea et al.(2010) NA 0.389577 0.3961 . View in GTEx CANDIDATE IGIB ./. - c.-18G>A - -
LTA NM_001159740.2 6 Unknown g.31540313A>G LTA_000002 TNFB rs909253 -;G NA; SAUDI Laddha et al.(2013);Al et al.(2013) 0.2087 0.389776 0.3965 . View in GTEx EXPRESSION, CANDIDATE IGIB ./. - c.-9-198A>G r.(=) p.(=)
LTA NM_001159740.2 6 Unknown g.31540784C>A LTA_000003 TNFB rs1041981 - NA Laddha et al.(2013) 0.2087 0.389577 0.3925 0.3496 View in GTEx EXPRESSION IGIB ./. - c.179C>A r.(?) p.(Thr60Asn)
MBL2 NM_000242.2 10 Unknown g.54531235C>T MBL2_000001 MBL2 rs1800450 - NA Onay et al.(2007) 0.1581 0.122005 0.1123 0.1389 View in GTEx CANDIDATE IGIB ./. - c.161G>A r.(?) p.(Gly54Asp)
MC1R NM_002386.3 16 Unknown g.89986144C>T MC1R_000001 MC1R rs1805008 - CAUCASIAN/EUROPEAN Széll et al.(2008) 0.002066 0.0145767 0.0504 0.0503 View in GTEx CANDIDATE IGIB ./. - c.478C>T r.(?) p.(Arg160Trp)
MC1R NM_002386.3 16 Unknown g.89985940G>A MC1R_000002 MC1R rs2228479 A KOREAN Na et al.(2003) 0.02169 0.0796725 0.0767 0.0764 View in GTEx CANDIDATE IGIB ./. - c.274G>A r.(?) p.(Val92Met)
MC1R NM_002386.3 16 Unknown g.89985441A>T MC1R_000004 MC1R rs3212363 A TAIWAN Yu et al.(2016) 0.4217 0.485823 0.625 . View in GTEx Candidate IGIB ./. - c.-226A>T r.(=) p.(=)
MC1R NM_002386.3 16 Unknown g.89986608A>G MC1R_000003 MC1R rs2228478 G Taiwan Yu et al.(2016) 0.1932 0.258986 0.2105 0.1502 View in GTEx Candidate IGIB ./. - c.942A>G r.(=) p.(=)
MIR31HG NR_027054.1 9 Unknown g.21481483G>A IFNE_000001 IFNE rs2039381 T KOREAN Cho et al.(2013) 0.1436 0.0980431 0.0358 0.045 View in GTEx CANDIDATE IGIB ./. - n.211-4192C>T - -
MTHFR NM_005957.4 1 Unknown g.11856378G>A MTHFR_000001 MTHFR rs1801133 T HAN CHINESE Chen et al.(2014) 0.1291 0.245407 0.2572 0.3037 View in GTEx CANDIDATE IGIB ./. - c.665C>T r.(?) p.(Ala222Val)
NEK6 NM_014397.5 9 Unknown g.127071493T>C NEK6_000001 NEK6 rs10986311 C EUROPEAN Jin et al.(2016) NA 0.303514 0.3438 . View in GTEx GWAS IGIB ./. - c.91-3295T>C r.(=) p.(=)
NLRP1 NM_033004.3 17 Unknown g.5425077T>C NLRP1_000003 NLRP1 rs11651270 - EUROPEAN Levandowski et al.(2013) 0.4375 0.417931 0.4631 0.4549 View in GTEx CANDIDATE IGIB ./. - c.3550A>G r.(?) p.(Met1184Val)
NLRP1 NM_033004.3 17 Unknown g.5420328C>T NLRP1_000002 NLRP1 rs6502867 -;A;- INDIAN; CAUCASIAN; ROMANIAN Dwivedi et al.(2013);Jin et al.(2007);Jin et al.(2009) 0.8582 0.873003 0.8273 . View in GTEx EXPRESSION, CANDIDATE IGIB ./. - c.4057+738G>A r.(=) p.(=)
NLRP1 NM_033004.3 17 Unknown g.5485367A>T NLRP1_000001 NLRP1 rs12150220 -;- INDIAN; EUROPEAN Dwivedi et al.(2013);Levandowski et al.(2013) NA 0.192093 0.3254 0.3749 View in GTEx EXPRESSION, CANDIDATE IGIB ./. - c.464T>A r.(?) p.(Leu155His)
NOS2 NM_000625.4 17 Unknown g.26096597G>A NOS2_000001 iNOS rs2297518 C;C HAN CHINESE; EGYPTIAN Zhang et al.(2011);Zayed et al.(2014) 0.8543 0.834665 0.8359 0.8223 View in GTEx CANDIDATE IGIB ./. - c.1823C>T r.(?) p.(Ser608Leu)
NPY NM_000905.3 7 Unknown g.24324879T>C NPY_000001 NPY rs16139 - INDIAN Laddha et al.(2014) 0.02789 0.0169728 0.032 0.0303 View in GTEx CANDIDATE IGIB ./. - c.20T>C r.(?) p.(Leu7Pro)
NR1H3 NM_005693.3 11 Unknown g.47280762G>A NR1H3_000001 NR1H3 rs11039155 A INDIAN Agrawal et al.(2016) 0.1636 0.0796725 0.1217 0.1333 View in GTEx Candidate IGIB ./. - - - -
NR1H3 NM_005693.3 11 Unknown g.47282024C>T NR1H3_000002 NR1H3 rs2279238 T INDIAN Agrawal et al.(2016) 0.2816 0.353834 0.2661 0.2473 View in GTEx Candidate IGIB ./. - - - -
PLCB3 NM_000932.2 11 Unknown g.64021605G>A PLCB3_000001 PLCB3 rs12421615 A EUROPEAN Jin et al.(2016) NA 0.163139 0.2585 . View in GTEx GWAS IGIB ./. - c.100-282G>A r.(=) p.(=)
PPP3CA NM_000944.4 4 Unknown g.102223386C>A PPP3CA_000001 PPP3CA rs1031034 A EUROPEAN Jin et al.(2016) NA 0.367612 0.3048 . View in GTEx GWAS IGIB ./. - c.58+44510G>T r.(=) p.(=)
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