View gene NR1H3 - VitiVar - Compendium of genes and variants associated with vitiligo

VitiVar - Compendium of genes and variants associated with vitiligo

nuclear receptor subfamily 1, group H, member 3 (NR1H3)

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Curator: IGIB

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View gene NR1H3

General information
Gene symbol	NR1H3
Gene name	nuclear receptor subfamily 1, group H, member 3
Chromosome	11
Chromosomal band	p11.2
Gene Alias
Imprinted	Unknown
Genomic reference	NG_030392.1
Transcript reference	NM_005693.3
Study Type	Both
Expression Status[Source: Literature]	Associated with UPREGULATION in Vitiligo Kumar et al.(2012);Kumar et al.(2009); Agrawal et al.(2016)
Expression Summary[Source: Literature]	Sample : Skin;Blood;Saliva \|\| Population : NA;INDIAN \|\| Gene name used in study : LXR-ALPHA
Total number of public variants reported	2
Unique public DNA variants reported	2
Individuals with public variants	0
Hidden variants	0
Curators (1)	IGIB
Date created	September 03, 2015
Date last updated	September 03, 2015
Version	NR1H3:150903

Graphical displays and utilities
Graphs	Graphs displaying summary information of all variants in the database »
UCSC Genome Browser	Show variants in the UCSC Genome Browser (full view, compact view)
Ensembl Genome Browser	Show variants in the Ensembl Genome Browser (full view, compact view)
NCBI Sequence Viewer	Show distribution histogram of variants in the NCBI Sequence Viewer

Links to other resources
Gene Expression Meta-Analysis	http://vitivar.igib.res.in/gestatus.php?id=NR1H3
HGNC	7966
Entrez Gene	10062
PubMed articles	NR1H3
OMIM - Gene	602423

Active transcripts

Legend

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ID	Chr	Name	NCBI ID	NCBI Protein ID	Variants
00378	11	transcript variant 1	NM_005693.3	NP_005684.2	2